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RESEARCH METHODS AND TECHNIQUES OF ASSESSMENT OF BRAIN FUNCTION:Activating brain

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NeurologicalBasis of Behavior (PSY - 610)
VU
Lesson14
RESEARCHMETHODS AND TECHNIQUES OF ASSESSMENT OF BRAIN FUNCTION
Objectives:
To familiarize the studentswith
·  Thevarious techniques used to study the brain and its function andstructures.
·  Invasivevs. Non- Invasive methods,Stereotaxic surgery.
·  StereotaxicAtlas used for brain surgery and manipulation,
·  Hislotogical and cytological methods forCell staining, Radiolabelling, Flourescence,
autoradiography,Lesioning and electricalstimulation, single cell recordings, push-pull
cannulae.
·  Theadvanced techniques such as MRI,fMRI, CAT, PET, CT, EEG,EOG, EMG, X Rayetc
Histological,electrical chemical and pharmacologicalprocesses and techniques why so many?
·
Advancedtechnologies and methodologies
In order to identify brain areas specific sites and relate behaviors and functions with these sites,
traditional neuro anatomy uses techniques which are invasive. These techniques actually involve
entering the brain to record, to lesion or to bring about a change in the normal brain areas/systems.
There are many techniques which are used to do such as stimulation of brain areas using electrical
current to those areas, damaging (lesioning) areas of interest, drawing chemicals from a site through
push-pull cannulae technique and many others. Again, these can be used in combination with each other
or with other techniques (usually histology follows such manipulations). Keeping in view the
complexity of the brain, each of these techniques requires skills and training in order to the surgery-
brain surgery of animals. This requires being well trained in using the Stereotaxic instrument and the
Stereotaxic atlas
Stereotaxic instrument and surgery
Stereotaxicinstrument allows the restriction of the animal's body and head so that it is immovable,and
sensitive insertion of fine electrodescan be made. Using the Stereotaxic instrument the scientist can
place electrodes or conduct other surgicalprocedures using precisepositioning. These are in 3
dimensions, anterior-posterior (A-P: front-back), dorsal-ventral (D-Vtop-down), Medial-Lateral(M-L:
center­sides). The Stereotaxicinstrument is made of steelwith several mainparts.
a) It has a head holder (for making sure that there are no head movements),
b) The ear bars which support the head in a position by locking onto the ear bones,
c) The electrode holder which can move in three dimensions described above (sideways, front and
back, up and down using a system which allows movement of electrode holder to follow exact
measurements.
Howdoes one use the Stereotaxic instrument? We follow the specifications given in the Stereotaxic
atlas (check out figure: one pageout of the rat brain atlas). These are prepared afterstudying dissections
of several hundred brains, here arespecific atlases for eachspecies (monkeys, mice, cats,dogs, etc)
Stereotaxicatlas: This is like a geographical atlas where dimensions are given to arrive at particular
location.These locations areidentified using two majorsutures (lines where bones of the skull join) and
the point they meet. In the anterior we use Bregma, Lambda is the posterior line. Using these as the
reference points we can move in anydirection in accordance with the atlas, and drill a hole in the skull
to lower the electrode in place.
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NeurologicalBasis of Behavior (PSY - 610)
VU
Activatingbrain: Thiscan be done using electrodes(to pass the electricalcurrent) or through chemical
stimulation
·
Electrical stimulation. Electrodes (extremely thin for microelectrode, and insect pins for
macrolectrode) are prepared using insulated needles, leaving .5mm uninsulated tip to allow
current to pass through in the e brain are stereotaxically implanted in the brain. Insertions are
carried out using directions from the stereotaxic atlas placing the animal in the Stereotaxic
apparatus. The electrodes are implanted using dental cement to fix electrode for permanent use.
Once the electrode is set then weak electrical current can be passed through the electrodes to
the neurons to see the effect on behavior. Bipolar Electrodes are used to stimulate and measure
electrical charge and behavior at the same time. Behavioral and electrical response is dependent
upon the site in the brain, the amount of current/ charge the intensity and duration of
stimulation.
·
Animal'sstudies usingelectrical stimulation have providedresearchers a lot of information
about the brain. For example, one of the major behavior is selfstimulation, and the discovery of
selfstimulation areas thoseareas in which animals sendthemselves electrical current to the
pointthat they forego food and water to get this current in their brains ii) unilateralelectrical
stimulation of the substantia nigra( rich in Dopamine) and circling behavioriii) aggression.
·
In Humans, extremelyinteresting studies were carriedout by Roger Penfield and colleagues
who have identified areas by carryingout electrical stimulationprior to surgery to seewhich
areasand behaviors are going to affected, this led to the development and preparation of the
Motor homunculus ( dictionary of motor movements)
·
Microiontophoresis: This is an interesting method in which the chemical response of the
postsynaptic neuron is measured using a extremely thin doublebarreled glass pipette. Thetip of
innerpipette (which contains saline) is inserted into the membrane of the connecting cells. The
cellsoma is then stimulated with a weak current; this is thenpassed to stimulate the neuronal
endingleading to an electrical chemical discharge. This discharge is then is pulledout for
analysis, this requires extreme precision andskill.
·
Chemicalstimulation: push­pull cannulae. This is a method similar to the one abovebut
instead of the electrodes we can usethin glass cannulae to insertchemicals and immediately
drawout metabolites for analysis of activity and NT. This we canuse to measure effects of
stimulation or inhibition by using appropriate chemical solutions.
·
Recording on going activity: we cancheck for Excitatory or inhibitory electricalaftereffects
on an instrument known as the oscilloscope.
Inactivatingthe brain; theseare the procedures in which we can inactivate the parts of the brain by
using specialized procedure.
·
Ablation:This is a procedure in which we remove a majorpart of the brain to studywhat
behaviors and functions would be affected.There are various techniques, these are discussed
belowthis is irreversible, as once we make the changes, lesions, we cannot reverse the process.
·
Suction or aspiration: In thistechnique brain tissue is sucked out through a glasspipette. This
requires extreme precision. Also it is difficult to go through thicker white matter on the surface
to get to the inner deeper areas.Ablation or suction is not a very commonly used procedure
because we may be damaging largerarea without knowing or intending to do so.
·
Radio frequency lesions: in this procedure we use the alternating highfrequency currentfrom
tip of electrode which is placed in a preciselocation in the brain. Theheat from the current
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NeurologicalBasis of Behavior (PSY - 610)
VU
destroys the tissue and the sizeregion of damage is the same as that of the tip of the electrode.
Theintensity and duration of current, the area in which we have lesionedwould also be
important in the effects. It is a fairly safe procedure as the electrode passing through toptissue
leaves the overlying areas unharmed. This is also irreversibledamage.
·
Knife cuts: verythin knifes are used to section out /cut or to damage connections between
brainareas. This helps us isolateare using precision knifecuts. What about
remaining/adjoiningareas? How has the damageaffected their functioning?This is also
irreversibledamage
·
Cryogenic freeze: (reversible). In this technique we freeze the brain area with cryoprobe (a
thinpipe with some mechanism to cool/ or artificial ice).The coolant is inserted and as soon as
the brain area freezes, it stopsfunctioning. We can assessbehaviors which do notoccur. This
brainareas returns functioning when the it becomes warm For otherreversible techniques, local
anestheticsare also used effectively ( the sodium amytal test for language functioning and
assessingbrain hemispheric differences)
Lesioningirreversible This is an irreversible technique, meaningthat the damage is permanent.
Lesioningcan be electrical, (or radiolesioning as discussedearlier).
·
Electrolytic:Thisinvolves passing a highfrequency direct electricalcurrent through the
stereotaxically placed electrodes and preciselocation/area is damaged throughelectrolysis.
There is minimal damaged and veryfocused in the area.
·
Chemical:Thisinvolves injecting selective neurotoxins (poisons) and other degenerative
substanceswhich can kill offliving neurons. There aresubstances such as 6-OHDAwhich are
selective toxins for dopamine. This is retrograde and travels fromthe synapse to the cellbody.
·
Bilaterallesions: Theseare lesions carried out on the areas on both sides (left and the right
hemisphere), therefore the effect is more intense.
·
Unilaterallesions involveonly one side of the brain:This is good experimental design as one
sideacts as the control for the other, but the changes may be small and may not be easy to
detect.
·
Shortcomings of this technique: Lesions require histological verificationsafter behavioral
testsare over. Further, the areas adjacent to the lesions are also affectedand the behaviors
observed and tested may be confounded by these. There aredifficulties in interpretation as
there is the irritation of neighboring neurons. Furthermore there are issues of adaptability of the
brainareas (to the damage),plasticity of the brain (recoveryand learning).
·
Points to ponder: Do thesechanges measure actual changes?
Electrophysiological methods: these are methods which measure changes of the electrical potential
and charge in the brain
·
Single microelectrode recording: a single thin neuron about 5-10 UM (micromolar), or a
microelectrode (1-3 UM) glass tubing or steel pens are used to record electrical potential. This
is how the all-or ­none axonal activity was measured and identified. This is also how responses
to a single stimulus single resulting in neuronal firing were first measured by Hubel and Weisel
using the visual systems of the kittens (intracellular/ extracellular recordings are possible with
this technique.
·
Macro electrodes: these involve inserting large electrodes in large neurons. The large tips help
measure evoked potentials (EP's) of these areas, (response to a stimulus or stimulation. There
are many neurons firing in an area, and these are then magnified to a point one can hear the loud
firing of the neurons in a typical EP average evoked potential.
·
Surface/Scalp electrode in a region: Electroencephalography recordings are done for the human
brain and recording can show variation (during sleep) and other behaviours.
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NeurologicalBasis of Behavior (PSY - 610)
VU
References:
1. Kalat J.W (1998) BiologicalPsychology Brooks/ ColePublishing
2. Carlson N.R. (2005) Foundations of Physiological Psychology Allyn and Bacon, Boston
3. Pinel, John P.J. (2003)Biopsychology (5th edition) Allyn and Bacon Singapore
4 Bloom F, Nelson and Lazerson (2001),Behavioral Neuroscience: Brain, Mind and Behaviors (3rd
edition)Worth Publishers NewYork
5. Bridgeman,B (1988)The Biology of Behaviour and Mind. John Wileyand Sons NewYork
6. Seigel,G.J. ( Ed. in chief)Agranoff, B.W, Albers W.R.and Molinoff, P.B. (Eds) Basic
Neurochemistry:Molecular, Cellular and Medical Aspects.
Note:References#2, 3, and 4 are followedmost closely, as they have been used in teaching as well;
furtherindividual references/pages arealso given on the powerpoints of each lesson
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Table of Contents:
  1. INTRODUCTION:Descriptive, Experimental and/ or Natural Studies
  2. BRIEF HISTORICAL REVIEW:Roots of Behavioural Neurosciences
  3. SUB-SPECIALIZATIONS WITHIN THE BEHAVIORAL NEUROSCIENCES
  4. RESEARCH IN BEHAVIOURAL NEUROSCIENCES:Animal Subjects, Experimental Method
  5. EVOLUTIONARY AND GENETIC BASIS OF BEHAVIOUR:Species specific
  6. EVOLUTIONARY AND GENETIC BASIS OF BEHAVIOUR:Decent With Modification
  7. EVOLUTIONARY AND GENETIC BASIS OF BEHAVIOUR:Stereoscopic vision
  8. GENES AND EXPERIENCE:Fixed Pattern, Proteins, Genotype, Phenotypic
  9. GENES AND EXPERIENCE:Mendelian Genetics, DNA, Sex Influenced Traits
  10. GENES AND EXPERIENCE:Genetic Basis of behavior, In breeding
  11. GENES AND EXPERIENCE:Hybrid vigor, Chromosomal Abnormalities
  12. GENES AND EXPERIENCE:Behavioral Characteristics, Alcoholism
  13. RESEARCH METHODS AND TECHNIQUES OF ASSESSMENT OF BRAIN FUNCTION
  14. RESEARCH METHODS AND TECHNIQUES OF ASSESSMENT OF BRAIN FUNCTION:Activating brain
  15. RESEARCH METHODS AND TECHNIQUES OF ASSESSMENT OF BRAIN FUNCTION:Macro electrodes
  16. RESEARCH METHODS AND TECHNIQUES OF ASSESSMENT OF BRAIN FUNCTION:Water Mazes.
  17. DEVELOPMENT OF THE NERVOUS SYSTEM:Operation Head Start
  18. DEVELOPMENT OF THE NERVOUS SYSTEM:Teratology studies, Aristotle
  19. DEVELOPMENT OF THE NERVOUS SYSTEM:Stages of development, Neurulation
  20. DEVELOPMENT OF THE NERVOUS SYSTEM:Cell competition, Synaptic Rearrangement
  21. DEVELOPMENT OF THE NERVOUS SYSTEM:The issues still remain
  22. DEVELOPMENT OF THE NERVOUS SYSTEM:Post natal
  23. DEVELOPMENT OF THE NERVOUS SYSTEM:Oxygen level
  24. Basic Neuroanatomy:Brain and spinal cord, Glial cells, Oligodendrocytes
  25. Basic Neuroanatomy:Neuron Structure, Cell Soma, Cytoplasm, Nucleolus
  26. Basic Neuroanatomy:Control of molecules, Electrical charges, Proximal-distal
  27. Basic Neuroanatomy:Telencephalon, Mesencephalon. Myelencephalon
  28. Basic Neuroanatomy:Tegmentum, Substantia Nigra, MID BRAIN areas
  29. Basic Neuroanatomy:Diencephalon, Hypothalmus, Telencephalon, Frontal Lobe
  30. Basic Neurochemistry:Neurochemicals, Neuromodulator, Synaptic cleft
  31. Basic Neurochemistry:Changes in ionic gates, The direct method, Methods of Locating NT
  32. Basic Neurochemistry:Major Neurotransmitters, Mesolimbic, Metabolic degradation
  33. Basic Neurochemistry:Norepinephrine/ Noradrenaline, NA synthesis, Noadrenergic Pathways
  34. Basic Neurochemistry:NA and Feeding, NE and self stimulation: ICS
  35. Basic Neurochemistry:5HT and Behaviors, Serotonin and sleep, Other behaviours
  36. Basic Neurochemistry:ACH and Behaviors, Arousal, Drinking, Sham rage and attack
  37. Brain and Motivational States:Homeostasis, Temperature Regulation, Ectotherms
  38. Brain and Motivational States:Biological Rhythms, Circadian rhythms, Hunger/Feeding
  39. Brain and Motivational States:Gastric factors, Lipostatic theory, Neural Control of feeding
  40. Brain and Motivational States:Resting metabolic state, Individual differences
  41. Brain and Motivational States:Sleep and Dreams, Characteristics of sleep
  42. Higher Order Brain functions:Brain correlates, Language, Speech Comprehension
  43. Higher Order Brain functions:Aphasia and Dyslexia, Aphasias related to speech
  44. Higher Order Brain Functions:Principle of Mass Action, Long-term memory
  45. Higher Order Brain Functions:Brain correlates, Handedness, Frontal lobe